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Archive of posts published in the category: Comparison

A comparison of three programming languages for a full-fledged next-generation sequencing tool | BMC Bioinformatics

The sequence alignment/map format (SAM/BAM) [1] is the de facto standard in the bioinformatics community for storing mapped sequencing data. There exists a large body of work on tools for processing SAM/BAM files for analysis [1–15]. The SAMtools [1], Picard [2], and Genome Analysis Toolkit (GATK) [3] software packages developed by the Broad and Sanger institutes are considered to be reference implementations for many operations on SAM/BAM files, examples of which include sorting reads, marking polymerase chain reaction (PCR) and optical duplicates, recalibrating base quality scores, indel realignment, and various filtering options, which typically precede variant calling. Many alternative software packages [4–10, 12, 14, 15] focus on optimizing the computations of these operations, either by providing alternative algorithms, or by using parallelization, distribution, or other optimization techniques specific to their implementation language, which is often C, C++, or Java.

We have developed elPrep [8, 16], an open-source, multi-threaded framework for

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Sell Your Gadgets – Gadget Selling Price Comparison

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Compare Gadget Recyclers and get the best price for your unwanted gadgets. Sell to recycle old gadgets.

Sell Your Gadgets - Gadget Selling Price Comparison Site

If you have a used or unwanted laptop, sat nav, games console, digital camera, MP3 player or other electronic gadget you can sell and recycle it for cash! Just browse our gadget recycling price comparison site for the type, make and model of your gadget, see what it’s worth, and Sell your Gadget today.

Perhaps you have an older model or maybe a broken gadget? Don’t worry as you can still be green and recycle it for Free! Just search for your gadget model and if the resale value is £0.00, you can still recycle gadgets.

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